Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_11415 | Not Available | Positive | 2649512 - 2649709 | 7301.79 |
| hypothetical protein | DXC44_11420 | Not Available | Negative | 2649959 - 2650213 | 9337.47 |
| para family protein | DXC44_11425 | Not Available | Negative | 2650221 - 2650976 | 27292.7 |
| single-stranded dna-binding protein | DXC44_11430 | Not Available | Negative | 2651223 - 2651636 | 14855.4 |
| hypothetical protein | DXC44_11435 | Not Available | Negative | 2652105 - 2652551 | 16876.5 |
| hypothetical protein | DXC44_11440 | Not Available | Positive | 2652638 - 2652877 | 8705.31 |
| hypothetical protein | DXC44_11445 | Not Available | Negative | 2653004 - 2653222 | 7465.99 |
| hypothetical protein | DXC44_11450 | Not Available | Negative | 2653369 - 2653779 | 15880.5 |
| hypothetical protein | DXC44_11455 | Not Available | Negative | 2653809 - 2654333 | 20819.9 |
| integrase | DXC44_11465 | Not Available | Negative | 2657666 - 2658697 | 39652.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

