Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylmethionine decarboxylase | DXC44_11310 | Not Available | Negative | 2634061 - 2635728 | 63034.9 |
| hypothetical protein | DXC44_11315 | Not Available | Positive | 2635898 - 2636128 | 9171.14 |
| hypothetical protein | DXC44_11320 | Not Available | Negative | 2636300 - 2636509 | 8198.01 |
| eama family transporter | DXC44_11325 | Not Available | Positive | 2636534 - 2637427 | 32616.3 |
| arac family transcriptional regulator | DXC44_11330 | Not Available | Negative | 2637430 - 2638329 | 34671.7 |
| aldo/keto reductase | DXC44_11335 | Not Available | Positive | 2638595 - 2639782 | 43529.4 |
| alpha/beta fold hydrolase | DXC44_11340 | Not Available | Positive | 2639792 - 2640820 | 38842.1 |
| twin-arginine translocation signal domain-containing protein | DXC44_11345 | Not Available | Positive | 2640817 - 2640900 | 3126.8 |
| twin-arginine translocase tata/tate family subunit | DXC44_11350 | Not Available | Positive | 2640931 - 2641128 | 7166.1 |
| twin-arginine translocase subunit tatc | DXC44_11355 | Not Available | Positive | 2641130 - 2641933 | 29679.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

