Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_11210 | Not Available | Positive | 2616145 - 2616555 | 16150.3 |
| hypothetical protein | DXC44_11215 | Not Available | Positive | 2616586 - 2619144 | 96787.5 |
| hypothetical protein | DXC44_11220 | Not Available | Positive | 2619141 - 2619863 | 27719.5 |
| site-specific dna-methyltransferase | DXC44_11225 | Not Available | Positive | 2620019 - 2620777 | 29164.9 |
| duf5045 domain-containing protein | DXC44_11230 | Not Available | Positive | 2620853 - 2621620 | 28462.5 |
| hypothetical protein | DXC44_11235 | Not Available | Positive | 2621634 - 2622767 | 42091.2 |
| conjugative transposon protein trak | DXC44_11240 | Not Available | Positive | 2622795 - 2623409 | 23744.1 |
| hypothetical protein | DXC44_11245 | Not Available | Positive | 2623423 - 2623806 | 15013.2 |
| conjugative transposon protein tram | DXC44_11250 | Not Available | Positive | 2623879 - 2625030 | 42834.3 |
| hypothetical protein | DXC44_11255 | Not Available | Positive | 2625044 - 2625397 | 13709.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

