Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_11045 | Not Available | Negative | 2586745 - 2586942 | 7902.13 |
| yqge/algh family protein | DXC44_11050 | Not Available | Positive | 2586998 - 2587588 | 22412.9 |
| n-acetyltransferase | DXC44_11055 | Not Available | Negative | 2587581 - 2588117 | 20476.6 |
| hypothetical protein | DXC44_11060 | Not Available | Negative | 2588114 - 2588584 | 17754.4 |
| recombination protein recr | DXC44_11065 | Not Available | Negative | 2588605 - 2589222 | 22458.3 |
| sodium:solute symporter | DXC44_11070 | Not Available | Positive | 2589301 - 2590782 | 55340.7 |
| gtp-binding protein | DXC44_11075 | Not Available | Positive | 2590748 - 2591350 | 23034.9 |
| hypothetical protein | DXC44_11080 | Not Available | Negative | 2591464 - 2592576 | 42448.4 |
| eama/rhat family transporter | DXC44_11085 | Not Available | Positive | 2592807 - 2593721 | 33034.2 |
| rna-binding protein | DXC44_11095 | Not Available | Negative | 2596262 - 2596507 | 9169.97 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

