Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DXC44_10990 | Not Available | Negative | 2575332 - 2576009 | 25927.3 |
| hypothetical protein | DXC44_10995 | Not Available | Negative | 2576230 - 2576967 | 27752.0 |
| arylsulfatase | DXC44_11000 | Not Available | Positive | 2577459 - 2579006 | 56965.6 |
| crp/fnr family transcriptional regulator | DXC44_11005 | Not Available | Negative | 2579287 - 2579877 | 22019.1 |
| hydroxylamine reductase | DXC44_11010 | Not Available | Positive | 2579992 - 2581650 | 61195.4 |
| iron-sulfur cluster repair di-iron protein | DXC44_11015 | Not Available | Positive | 2581662 - 2582393 | 27847.1 |
| glycoside hydrolase family 95 protein | DXC44_11020 | Not Available | Negative | 2582473 - 2584932 | 91841.3 |
| mobilization protein | DXC44_11025 | Not Available | Positive | 2584957 - 2585415 | 18105.8 |
| hypothetical protein | DXC44_11030 | Not Available | Positive | 2585562 - 2586029 | 18222.9 |
| Trna-asp | Not Available | Not Available | Positive | 2586694 - 2586767 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

