Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_10940 | Not Available | Negative | 2564175 - 2564588 | 16367.0 |
| hypothetical protein | DXC44_10945 | Not Available | Negative | 2564598 - 2564852 | 9226.99 |
| atp synthase subunit beta | DXC44_10950 | Not Available | Negative | 2564861 - 2566396 | 56123.4 |
| m20/m25/m40 family metallo-hydrolase | DXC44_10955 | Not Available | Negative | 2566592 - 2568139 | 57286.9 |
| ppx/gppa family phosphatase | DXC44_10960 | Not Available | Negative | 2568282 - 2569196 | 34449.2 |
| rna degradosome polyphosphate kinase | DXC44_10965 | Not Available | Negative | 2569198 - 2571264 | 79787.9 |
| glycosyltransferase | DXC44_10970 | Not Available | Negative | 2571400 - 2572527 | 43509.6 |
| udp-2,3-diacylglucosamine diphosphatase | DXC44_10975 | Not Available | Negative | 2572524 - 2573327 | 31136.1 |
| hypothetical protein | DXC44_10980 | Not Available | Negative | 2573504 - 2573941 | 16855.3 |
| sensor histidine kinase | DXC44_10985 | Not Available | Negative | 2574045 - 2575331 | 49722.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

