Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | DXC44_10890 | Not Available | Negative | 2553862 - 2555013 | 43083.9 |
| vwa domain-containing protein | DXC44_10895 | Not Available | Negative | 2555156 - 2556469 | 51531.8 |
| atpase | DXC44_10900 | Not Available | Negative | 2556441 - 2558063 | 62448.7 |
| class i sam-dependent methyltransferase | DXC44_10905 | Not Available | Positive | 2558314 - 2559048 | 27895.3 |
| atp synthase subunit gamma | DXC44_10910 | Not Available | Negative | 2559136 - 2560005 | 32458.6 |
| atp synthase subunit alpha | DXC44_10915 | Not Available | Negative | 2560008 - 2561600 | 57717.7 |
| f0f1 atp synthase subunit delta | DXC44_10920 | Not Available | Negative | 2561722 - 2562279 | 20992.7 |
| atp synthase subunit b | DXC44_10925 | Not Available | Negative | 2562285 - 2562785 | 18885.0 |
| atp synthase f0 subunit c | DXC44_10930 | Not Available | Negative | 2562796 - 2563050 | 8151.6 |
| atp synthase f0 subunit a | DXC44_10935 | Not Available | Negative | 2563082 - 2564173 | 40549.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

