Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_10790 | Not Available | Positive | 2526230 - 2526778 | 20508.7 |
| copper-translocating p-type atpase | DXC44_10795 | Not Available | Negative | 2526866 - 2529079 | 80085.1 |
| duf3298 domain-containing protein | DXC44_10800 | Not Available | Positive | 2529258 - 2530106 | 32057.1 |
| ribosomal rna small subunit methyltransferase g | DXC44_10805 | Not Available | Positive | 2530127 - 2530756 | 23835.2 |
| mbl fold metallo-hydrolase | DXC44_10810 | Not Available | Positive | 2530774 - 2531412 | 23832.3 |
| glycine dehydrogenase (aminomethyl-transferring) | DXC44_10815 | Not Available | Positive | 2531448 - 2534297 | 105224.0 |
| s9 family peptidase | DXC44_10820 | Not Available | Negative | 2534578 - 2537292 | 102671.0 |
| hypothetical protein | DXC44_10825 | Not Available | Negative | 2537325 - 2537561 | 8845.62 |
| hypothetical protein | DXC44_10830 | Not Available | Positive | 2537685 - 2537912 | 8186.62 |
| formate--tetrahydrofolate ligase | DXC44_10835 | Not Available | Negative | 2537944 - 2539611 | 60542.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

