Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i pullulanase | DXC44_10740 | Not Available | Negative | 2517212 - 2519206 | 74625.4 |
| crossover junction endodeoxyribonuclease ruvc | DXC44_10745 | Not Available | Negative | 2519211 - 2519780 | 21117.3 |
| duf4286 family protein | DXC44_10750 | Not Available | Negative | 2519777 - 2520082 | 11925.3 |
| Trna-ala | Not Available | Not Available | Positive | 2520145 - 2520218 | Not Available |
| hypothetical protein | DXC44_10760 | Not Available | Negative | 2520869 - 2521078 | 7947.52 |
| hypothetical protein | DXC44_10765 | Not Available | Negative | 2521247 - 2521561 | 11444.2 |
| hypothetical protein | DXC44_10770 | Not Available | Positive | 2521808 - 2522290 | 18358.9 |
| long-chain fatty acid--coa ligase | DXC44_10775 | Not Available | Positive | 2522502 - 2524166 | 62496.0 |
| lipoyl(octanoyl) transferase lipb | DXC44_10780 | Not Available | Negative | 2524378 - 2525466 | 40847.6 |
| phosphohydrolase | DXC44_10785 | Not Available | Positive | 2525532 - 2526233 | 27543.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

