Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-ribosylglycohydrolase | DXC44_00885 | Not Available | Positive | 264079 - 264867 | 29900.8 |
| dna polymerase iv | DXC44_00890 | Not Available | Negative | 264848 - 265942 | 41319.9 |
| Trna-pro | Not Available | Not Available | Positive | 266204 - 266281 | Not Available |
| arac family transcriptional regulator | DXC44_00900 | Not Available | Negative | 266382 - 267242 | 34056.9 |
| 3-dehydroquinate synthase | DXC44_00905 | Not Available | Negative | 267516 - 268577 | 39850.1 |
| hypothetical protein | DXC44_00910 | Not Available | Positive | 268675 - 269079 | 15580.9 |
| tonb-dependent receptor | DXC44_00915 | Not Available | Positive | 269160 - 272057 | 108216.0 |
| cardiolipin synthase | DXC44_00920 | Not Available | Positive | 272150 - 273586 | 55394.1 |
| methyltransferase domain-containing protein | DXC44_00925 | Not Available | Negative | 273555 - 274115 | 21359.3 |
| duf3822 family protein | DXC44_00930 | Not Available | Negative | 274106 - 274930 | 32357.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

