Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase | DXC44_10335 | Not Available | Positive | 2419965 - 2420867 | 33013.7 |
| sodium:solute symporter | DXC44_10340 | Not Available | Positive | 2420885 - 2422768 | 70752.6 |
| hypothetical protein | DXC44_10345 | Not Available | Negative | 2423160 - 2423456 | 11143.8 |
| aldo/keto reductase | DXC44_10350 | Not Available | Positive | 2423693 - 2425075 | 52411.6 |
| 4fe-4s dicluster domain-containing protein | DXC44_10355 | Not Available | Positive | 2425111 - 2426637 | 55272.3 |
| duf1893 domain-containing protein | DXC44_10360 | Not Available | Positive | 2426655 - 2427074 | 15689.1 |
| cupin domain-containing protein | DXC44_10365 | Not Available | Positive | 2427252 - 2427806 | 20522.8 |
| acetyl-coa synthetase | DXC44_10370 | Not Available | Positive | 2427890 - 2429542 | 62326.4 |
| hypothetical protein | DXC44_10375 | Not Available | Positive | 2429577 - 2430041 | 17243.6 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DXC44_10380 | Not Available | Negative | 2430355 - 2432325 | 73993.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

