Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| argininosuccinate synthase | DXC44_10280 | Not Available | Positive | 2403793 - 2405001 | 45126.7 |
| n-acetyl-gamma-glutamyl-phosphate reductase | DXC44_10285 | Not Available | Positive | 2405007 - 2405975 | 36000.4 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | DXC44_10290 | Not Available | Positive | 2405989 - 2407113 | 40883.8 |
| pyrroline-5-carboxylate reductase | DXC44_10295 | Not Available | Positive | 2407297 - 2408070 | 27247.4 |
| arac family transcriptional regulator | DXC44_10300 | Not Available | Positive | 2408253 - 2409143 | 34355.3 |
| hypothetical protein | DXC44_10305 | Not Available | Negative | 2409136 - 2409366 | 9117.75 |
| glycoside hydrolase | DXC44_10310 | Not Available | Positive | 2409476 - 2410990 | 55556.3 |
| ragb/susd family nutrient uptake outer membrane protein | DXC44_10320 | Not Available | Positive | 2414877 - 2416643 | 67709.4 |
| aryl-sulfate sulfotransferase | DXC44_10325 | Not Available | Positive | 2416716 - 2418515 | 68327.1 |
| glycosidase | DXC44_10330 | Not Available | Positive | 2418629 - 2419807 | 44114.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

