Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-phe | Not Available | Not Available | Positive | 2351905 - 2351980 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 2352161 - 2352233 | Not Available |
| alpha-galactosidase | DXC44_10085 | Not Available | Positive | 2352516 - 2354123 | 60459.4 |
| luxr family transcriptional regulator | DXC44_10090 | Not Available | Positive | 2354174 - 2354944 | 29451.5 |
| phosphoglycerate mutase family protein | DXC44_10095 | Not Available | Negative | 2354962 - 2355546 | 22907.3 |
| mate family efflux transporter | DXC44_10100 | Not Available | Negative | 2355661 - 2356953 | 48405.7 |
| hypothetical protein | DXC44_10105 | Not Available | Negative | 2357168 - 2358007 | 32293.0 |
| leucyl/phenylalanyl-trna--protein transferase | DXC44_10110 | Not Available | Negative | 2358148 - 2358801 | 25002.2 |
| aaa family atpase | DXC44_10115 | Not Available | Negative | 2358897 - 2361125 | 83031.5 |
| atp-dependent clp protease adaptor clps | DXC44_10120 | Not Available | Negative | 2361143 - 2361451 | 12034.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

