Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain TF05-18
Accession NumberQSSN00000000.1
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Terminase large subunit | DXC44_12025 | Not Available | + | 2754096 - 2755724 | 61356.1 |
| Portal protein | DXC44_12030 | Not Available | + | 2755724 - 2756956 | 45809.7 |
| hypothetical protein | DXC44_12035 | Not Available | + | 2756928 - 2757269 | 13023.4 |
| Putative tail fiber protein | DXC44_12040 | Not Available | + | 2757269 - 2757769 | 18109.3 |
| Head maturation protease | DXC44_12045 | Not Available | + | 2757780 - 2758328 | 20511.2 |
| Putative phage major capsid protein | DXC44_12050 | Not Available | + | 2758328 - 2759509 | 42271.4 |
| Head-tail connector protein | DXC44_12055 | Not Available | + | 2759538 - 2759840 | 11393.9 |
| Gp9 | DXC44_12060 | Not Available | + | 2759837 - 2760154 | 12243.6 |
| hypothetical protein | DXC44_12065 | Not Available | + | 2760147 - 2760647 | 18963.6 |
| duf3168 domain-containing protein | DXC44_12070 | Not Available | + | 2760644 - 2761045 | 15110.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
