Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_10025 | Not Available | Negative | 2345595 - 2345804 | 7883.19 |
| hypothetical protein | DXC44_10030 | Not Available | Negative | 2345780 - 2346079 | 11785.8 |
| hypothetical protein | DXC44_10035 | Not Available | Negative | 2346076 - 2346675 | 22949.8 |
| duf4313 domain-containing protein | DXC44_10040 | Not Available | Negative | 2346723 - 2347220 | 19151.7 |
| hypothetical protein | DXC44_10045 | Not Available | Negative | 2347271 - 2347522 | 9432.45 |
| hypothetical protein | DXC44_10050 | Not Available | Negative | 2347592 - 2348479 | 34762.8 |
| hypothetical protein | DXC44_10055 | Not Available | Negative | 2348483 - 2349625 | 44624.5 |
| hypothetical protein | DXC44_10060 | Not Available | Negative | 2349610 - 2349906 | 11165.2 |
| hypothetical protein | DXC44_10065 | Not Available | Positive | 2349934 - 2350128 | 7300.03 |
| site-specific integrase | DXC44_10070 | Not Available | Negative | 2350209 - 2351444 | 47036.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

