Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_09970 | Not Available | Negative | 2337857 - 2338738 | 33284.0 |
| hypothetical protein | DXC44_09975 | Not Available | Negative | 2338751 - 2339986 | 46885.8 |
| sam-dependent dna methyltransferase | DXC44_09980 | Not Available | Negative | 2340019 - 2340759 | 28510.6 |
| duf4121 family protein | DXC44_09985 | Not Available | Negative | 2340746 - 2341567 | 32146.2 |
| hypothetical protein | DXC44_09990 | Not Available | Negative | 2341554 - 2341832 | 11173.2 |
| duf4120 domain-containing protein | DXC44_10000 | Not Available | Negative | 2342114 - 2342404 | 11179.1 |
| hypothetical protein | DXC44_10005 | Not Available | Positive | 2342735 - 2343079 | 13340.1 |
| hypothetical protein | DXC44_10010 | Not Available | Negative | 2343138 - 2343848 | 27498.3 |
| hypothetical protein | DXC44_10015 | Not Available | Negative | 2343862 - 2344551 | 26683.5 |
| molecular chaperone dnaj | DXC44_10020 | Not Available | Negative | 2344562 - 2345581 | 39504.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

