Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_09820 | Not Available | Positive | 2315020 - 2315388 | 13773.7 |
| hypothetical protein | DXC44_09825 | Not Available | Positive | 2315555 - 2315824 | 10260.0 |
| hypothetical protein | DXC44_09830 | Not Available | Positive | 2315844 - 2316260 | 15885.5 |
| hypothetical protein | DXC44_09835 | Not Available | Positive | 2316271 - 2316834 | 22162.3 |
| conjugal transfer protein trag | DXC44_09840 | Not Available | Negative | 2316920 - 2318953 | 77243.1 |
| mobilization protein | DXC44_09845 | Not Available | Negative | 2318990 - 2320237 | 47215.1 |
| moba protein | DXC44_09850 | Not Available | Negative | 2320222 - 2320644 | 16379.0 |
| hypothetical protein | DXC44_09855 | Not Available | Positive | 2320643 - 2320933 | 10436.3 |
| hypothetical protein | DXC44_09860 | Not Available | Negative | 2320996 - 2321205 | 7560.13 |
| para family protein | DXC44_09865 | Not Available | Positive | 2321372 - 2322166 | 30006.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

