Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system needle protein hcp | DXC44_09720 | Not Available | Positive | 2298688 - 2299110 | 15865.0 |
| hypothetical protein | DXC44_09725 | Not Available | Positive | 2299124 - 2299540 | 15257.3 |
| hypothetical protein | DXC44_09730 | Not Available | Positive | 2299542 - 2300636 | 41364.2 |
| hypothetical protein | DXC44_09735 | Not Available | Positive | 2300584 - 2301057 | 18959.2 |
| hypothetical protein | DXC44_09740 | Not Available | Positive | 2301059 - 2301352 | 11621.9 |
| hypothetical protein | DXC44_09745 | Not Available | Positive | 2301367 - 2301765 | 15086.8 |
| hypothetical protein | DXC44_09750 | Not Available | Positive | 2301810 - 2302208 | 15421.0 |
| hypothetical protein | DXC44_09755 | Not Available | Positive | 2302199 - 2302663 | 17646.0 |
| flagellar protein flgn | DXC44_09760 | Not Available | Positive | 2302671 - 2304515 | 70247.0 |
| hypothetical protein | DXC44_09765 | Not Available | Positive | 2304527 - 2305405 | 33966.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

