Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | DXC44_09590 | Not Available | Positive | 2270965 - 2271432 | 16999.1 |
| hypothetical protein | DXC44_09595 | Not Available | Positive | 2271682 - 2272461 | 28257.2 |
| hypothetical protein | DXC44_09600 | Not Available | Negative | 2272542 - 2272919 | 14910.5 |
| hypothetical protein | DXC44_09605 | Not Available | Negative | 2273084 - 2274631 | 60485.4 |
| duf3873 domain-containing protein | DXC44_09610 | Not Available | Negative | 2274935 - 2275153 | 8468.14 |
| antirestriction protein arda | DXC44_09615 | Not Available | Negative | 2275231 - 2275764 | 21133.7 |
| tetr/acrr family transcriptional regulator | DXC44_09635 | Not Available | Negative | 2277881 - 2278429 | 21053.5 |
| 3-oxoacyl-acp synthase | DXC44_09640 | Not Available | Negative | 2278669 - 2279808 | 42559.4 |
| tetr/acrr family transcriptional regulator | DXC44_09645 | Not Available | Negative | 2279813 - 2280436 | 24099.3 |
| pseudohemocyanin | DXC44_09650 | Not Available | Negative | 2280913 - 2281893 | 38315.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

