Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase s41 | DXC44_00785 | Not Available | Positive | 246534 - 247973 | 54094.4 |
| biotin--[acetyl-coa-carboxylase] ligase | DXC44_00790 | Not Available | Negative | 247970 - 248737 | 29257.9 |
| mmcq/yjbr family dna-binding protein | DXC44_00795 | Not Available | Negative | 248721 - 249077 | 13937.7 |
| yran family protein | DXC44_00800 | Not Available | Negative | 249095 - 249460 | 14153.8 |
| hypothetical protein | DXC44_00805 | Not Available | Positive | 249536 - 249769 | 9401.63 |
| nucleoside deaminase | DXC44_00810 | Not Available | Positive | 249771 - 250205 | 15697.1 |
| duf4834 family protein | DXC44_00815 | Not Available | Negative | 250209 - 250511 | 11555.5 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | DXC44_00820 | Not Available | Negative | 250564 - 251271 | 26073.4 |
| phosphatidylserine decarboxylase proenzyme | DXC44_00825 | Not Available | Negative | 251283 - 251969 | 25956.1 |
| dna polymerase iii subunit alpha | DXC44_00830 | Not Available | Positive | 252161 - 255958 | 143977.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

