Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dicarboxylate/amino acid:cation symporter | DXC44_09470 | Not Available | Positive | 2242780 - 2243961 | 42233.4 |
| hypothetical protein | DXC44_09480 | Not Available | Positive | 2245575 - 2246135 | 21317.7 |
| ahpc/tsa family protein | DXC44_09485 | Not Available | Negative | 2246235 - 2247230 | 37167.8 |
| duf4091 domain-containing protein | DXC44_09490 | Not Available | Positive | 2247364 - 2249112 | 66414.3 |
| duf2149 domain-containing protein | DXC44_09495 | Not Available | Negative | 2249426 - 2249755 | 12445.0 |
| mota/tolq/exbb proton channel family protein | DXC44_09500 | Not Available | Negative | 2249757 - 2250356 | 22092.6 |
| hypothetical protein | DXC44_09505 | Not Available | Negative | 2250371 - 2251060 | 25152.1 |
| cobaltochelatase subunit cobn | DXC44_09510 | Not Available | Negative | 2251067 - 2255542 | 166053.0 |
| tonb-dependent receptor | DXC44_09515 | Not Available | Negative | 2255589 - 2257745 | 81237.8 |
| hypothetical protein | DXC44_09520 | Not Available | Negative | 2257759 - 2258421 | 24838.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

