Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_09270 | Not Available | Negative | 2193299 - 2193616 | 12033.2 |
| septum formation initiator family protein | DXC44_09275 | Not Available | Negative | 2193640 - 2193936 | 11882.5 |
| dna polymerase iii subunit gamma/tau | DXC44_09280 | Not Available | Positive | 2194055 - 2195866 | 67555.0 |
| Trna-ser | Not Available | Not Available | Positive | 2196227 - 2196317 | Not Available |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | DXC44_09290 | Not Available | Negative | 2196405 - 2196860 | 17765.2 |
| 7-cyano-7-deazaguanine synthase quec | DXC44_09295 | Not Available | Negative | 2197079 - 2197750 | 24879.9 |
| vut family protein | DXC44_09300 | Not Available | Negative | 2197871 - 2198557 | 25069.6 |
| ornithine--oxo-acid transaminase | DXC44_09305 | Not Available | Negative | 2198848 - 2200083 | 45621.9 |
| amidinotransferase | DXC44_09310 | Not Available | Negative | 2200098 - 2201009 | 34265.0 |
| amidinotransferase | DXC44_09315 | Not Available | Negative | 2201032 - 2201952 | 35512.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

