Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4136 domain-containing protein | DXC44_09220 | Not Available | Positive | 2181521 - 2182159 | 24018.1 |
| porin family protein | DXC44_09225 | Not Available | Positive | 2182201 - 2182827 | 23477.8 |
| polyprenol monophosphomannose synthase | DXC44_09230 | Not Available | Positive | 2182980 - 2183729 | 28446.6 |
| dihydroorotase | DXC44_09235 | Not Available | Positive | 2183726 - 2185066 | 49602.5 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | DXC44_09240 | Not Available | Positive | 2185063 - 2185950 | 33463.9 |
| metallophosphoesterase | DXC44_09245 | Not Available | Positive | 2185965 - 2187125 | 43697.4 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | DXC44_09250 | Not Available | Positive | 2187165 - 2187923 | 28645.4 |
| duf4369 domain-containing protein | DXC44_09255 | Not Available | Negative | 2187938 - 2188615 | 25343.6 |
| s46 family peptidase | DXC44_09260 | Not Available | Positive | 2188830 - 2190995 | 81216.0 |
| s46 family peptidase | DXC44_09265 | Not Available | Positive | 2190995 - 2193181 | 82680.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

