Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_09120 | Not Available | Positive | 2155313 - 2156380 | 39844.5 |
| toprim domain-containing protein | DXC44_09125 | Not Available | Positive | 2156465 - 2158471 | 74894.9 |
| duf4248 domain-containing protein | DXC44_09130 | Not Available | Negative | 2158580 - 2158819 | 9222.05 |
| dna-binding protein | DXC44_09135 | Not Available | Positive | 2159100 - 2159573 | 16817.1 |
| n-acetylmuramoyl-l-alanine amidase | DXC44_09140 | Not Available | Positive | 2159723 - 2160136 | 15359.6 |
| hypothetical protein | DXC44_09145 | Not Available | Negative | 2160149 - 2160679 | 20088.5 |
| hypothetical protein | DXC44_09150 | Not Available | Negative | 2160679 - 2161674 | 37563.0 |
| 4fe-4s dicluster domain-containing protein | DXC44_09155 | Not Available | Negative | 2161737 - 2162981 | 47034.9 |
| glycosyltransferase | DXC44_09160 | Not Available | Negative | 2162978 - 2163988 | 39428.1 |
| lipopolysaccharide biosynthesis protein | DXC44_09165 | Not Available | Negative | 2163975 - 2165531 | 59074.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

