Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DXC44_09070 | Not Available | Negative | 2147333 - 2148049 | 27647.6 |
| hypothetical protein | DXC44_09075 | Not Available | Positive | 2148104 - 2148418 | 12249.5 |
| duf86 domain-containing protein | DXC44_09080 | Not Available | Negative | 2148446 - 2148829 | 14546.1 |
| dna polymerase subunit beta | DXC44_09085 | Not Available | Negative | 2148822 - 2149115 | 11179.7 |
| glycosyltransferase family 1 protein | DXC44_09090 | Not Available | Negative | 2149215 - 2150318 | 42063.5 |
| glycosyltransferase family 2 protein | DXC44_09095 | Not Available | Negative | 2150381 - 2151340 | 36493.2 |
| glycosyltransferase | DXC44_09100 | Not Available | Negative | 2151452 - 2152609 | 44101.2 |
| epsg family protein | DXC44_09105 | Not Available | Negative | 2152599 - 2153702 | 42427.0 |
| polysaccharide pyruvyl transferase family protein | DXC44_09110 | Not Available | Negative | 2153704 - 2154795 | 42707.4 |
| hypothetical protein | DXC44_09115 | Not Available | Negative | 2155039 - 2155314 | 10400.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

