Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_08915 | Not Available | Positive | 2109136 - 2109375 | 9468.92 |
| linear amide c-n hydrolase | DXC44_08920 | Not Available | Positive | 2109534 - 2110592 | 39406.4 |
| hypothetical protein | DXC44_08925 | Not Available | Positive | 2110827 - 2111285 | 17637.3 |
| hsp20/alpha crystallin family protein | DXC44_08930 | Not Available | Positive | 2111550 - 2111993 | 16943.0 |
| hypothetical protein | DXC44_08935 | Not Available | Negative | 2112129 - 2113703 | 58686.1 |
| hypothetical protein | DXC44_08940 | Not Available | Negative | 2113747 - 2115147 | 52376.5 |
| dna-binding protein | DXC44_08945 | Not Available | Negative | 2115522 - 2116145 | 23853.8 |
| helicase | DXC44_08955 | Not Available | Positive | 2116550 - 2118640 | 81532.2 |
| thioredoxin | DXC44_08960 | Not Available | Positive | 2118871 - 2119131 | 10400.5 |
| 50s ribosomal protein l11 methyltransferase | DXC44_08965 | Not Available | Positive | 2119142 - 2119987 | 31687.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

