Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | DXC44_08765 | Not Available | Positive | 2077730 - 2078890 | 44239.4 |
| acyltransferase | DXC44_08770 | Not Available | Positive | 2078895 - 2079506 | 22980.1 |
| duf4422 domain-containing protein | DXC44_08775 | Not Available | Positive | 2079491 - 2080315 | 32718.4 |
| glycosyltransferase | DXC44_08780 | Not Available | Positive | 2080319 - 2081266 | 36866.2 |
| glycosyltransferase | DXC44_08785 | Not Available | Negative | 2081284 - 2082099 | 31373.7 |
| glycosyl transferase | DXC44_08790 | Not Available | Negative | 2082120 - 2083037 | 35711.9 |
| abc transporter atp-binding protein | DXC44_08795 | Not Available | Negative | 2083053 - 2084324 | 46728.6 |
| abc transporter permease | DXC44_08800 | Not Available | Negative | 2084338 - 2085201 | 33261.8 |
| glycosyltransferase family 4 protein | DXC44_08805 | Not Available | Negative | 2085188 - 2086369 | 44909.2 |
| glycosyltransferase family 2 protein | DXC44_08810 | Not Available | Positive | 2086981 - 2087931 | 37209.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

