Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf86 domain-containing protein | DXC44_08615 | Not Available | Negative | 2041543 - 2041917 | 14517.8 |
| nucleotidyltransferase | DXC44_08620 | Not Available | Negative | 2041910 - 2042203 | 11121.5 |
| carboxypeptidase-like regulatory domain-containing protein | DXC44_08625 | Not Available | Negative | 2042312 - 2044885 | 99185.7 |
| phosphate transport system regulatory protein phou | DXC44_08630 | Not Available | Negative | 2045287 - 2045988 | 26687.2 |
| phosphate abc transporter atp-binding protein | DXC44_08635 | Not Available | Negative | 2046192 - 2046944 | 28156.9 |
| phosphate abc transporter permease psta | DXC44_08640 | Not Available | Negative | 2047042 - 2047929 | 32091.4 |
| phosphate abc transporter permease subunit pstc | DXC44_08645 | Not Available | Negative | 2048026 - 2049213 | 42864.7 |
| psts family phosphate abc transporter substrate-binding protein | DXC44_08650 | Not Available | Positive | 2049481 - 2050299 | 29967.5 |
| glutamine--trna ligase/yqey domain fusion protein | DXC44_08655 | Not Available | Positive | 2050357 - 2052096 | 66876.0 |
| multidrug transporter | DXC44_08660 | Not Available | Positive | 2052107 - 2053624 | 59258.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

