Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_08515 | Not Available | Positive | 2022325 - 2022639 | 13007.3 |
| toprim domain-containing protein | DXC44_08520 | Not Available | Negative | 2023021 - 2024544 | 58018.8 |
| duf4373 domain-containing protein | DXC44_08525 | Not Available | Negative | 2025018 - 2026559 | 57922.0 |
| hypothetical protein | DXC44_08530 | Not Available | Negative | 2026793 - 2027050 | 9765.74 |
| putative toxin-antitoxin system toxin component, pin family | DXC44_08535 | Not Available | Negative | 2027159 - 2027566 | 15726.8 |
| hypothetical protein | DXC44_08540 | Not Available | Negative | 2027580 - 2027795 | 8582.31 |
| hypothetical protein | DXC44_08545 | Not Available | Negative | 2027985 - 2028797 | 30846.6 |
| glycosyltransferase | DXC44_08550 | Not Available | Negative | 2028802 - 2029518 | 27625.6 |
| glycosyltransferase family 1 protein | DXC44_08555 | Not Available | Negative | 2029545 - 2030660 | 42619.1 |
| glycosyltransferase | DXC44_08560 | Not Available | Negative | 2030688 - 2031782 | 42308.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

