Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_08465 | Not Available | Negative | 2013382 - 2013585 | 7433.15 |
| c_gcaxxg_c_c family protein | DXC44_08470 | Not Available | Negative | 2013742 - 2014245 | 18588.2 |
| d-2-hydroxyacid dehydrogenase | DXC44_08475 | Not Available | Negative | 2014289 - 2015245 | 34358.8 |
| replication-associated recombination protein a | DXC44_08480 | Not Available | Negative | 2015416 - 2016693 | 47220.9 |
| hypothetical protein | DXC44_08485 | Not Available | Negative | 2016678 - 2016863 | 7590.64 |
| hypothetical protein | DXC44_08490 | Not Available | Positive | 2016934 - 2019009 | 78319.6 |
| quinoprotein amine dehydrogenase | DXC44_08495 | Not Available | Positive | 2019041 - 2020117 | 39569.4 |
| duf4248 domain-containing protein | DXC44_08500 | Not Available | Negative | 2020341 - 2020559 | 8477.29 |
| dna-binding protein | DXC44_08505 | Not Available | Positive | 2020911 - 2021399 | 17535.0 |
| n-acetylmuramoyl-l-alanine amidase | DXC44_08510 | Not Available | Positive | 2021659 - 2022075 | 15828.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

