Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix domain-containing protein | DXC44_08105 | Not Available | Negative | 1937529 - 1938053 | 19815.6 |
| hlyc/corc family transporter | DXC44_08110 | Not Available | Positive | 1938188 - 1939474 | 48001.9 |
| hypothetical protein | DXC44_08115 | Not Available | Positive | 1939497 - 1939880 | 15190.0 |
| asnc family transcriptional regulator | DXC44_08120 | Not Available | Positive | 1939997 - 1940455 | 17087.9 |
| duf4491 family protein | DXC44_08125 | Not Available | Positive | 1940462 - 1940776 | 12155.1 |
| hypothetical protein | DXC44_08130 | Not Available | Negative | 1940976 - 1941419 | 17109.1 |
| hypothetical protein | DXC44_08135 | Not Available | Positive | 1941445 - 1942173 | 28522.1 |
| hypothetical protein | DXC44_08140 | Not Available | Positive | 1942116 - 1942424 | 12084.6 |
| hypothetical protein | DXC44_08145 | Not Available | Positive | 1942880 - 1943308 | 16662.0 |
| beta-galactosidase | DXC44_08150 | Not Available | Negative | 1944068 - 1946107 | 78198.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

