Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_08005 | Not Available | Positive | 1913758 - 1914177 | 15775.0 |
| mfs transporter araj | DXC44_08010 | Not Available | Negative | 1914138 - 1915319 | 42104.0 |
| hypothetical protein | DXC44_08015 | Not Available | Negative | 1915512 - 1915760 | 8752.23 |
| radical sam protein | DXC44_08020 | Not Available | Negative | 1915781 - 1916851 | 41120.6 |
| hypothetical protein | DXC44_08025 | Not Available | Negative | 1916848 - 1917804 | 36422.5 |
| hypothetical protein | DXC44_08030 | Not Available | Negative | 1918144 - 1920630 | 89275.1 |
| arac family transcriptional regulator | DXC44_08035 | Not Available | Negative | 1920696 - 1921196 | 19502.5 |
| hypothetical protein | DXC44_08040 | Not Available | Negative | 1921805 - 1922101 | 11615.0 |
| hypothetical protein | DXC44_08045 | Not Available | Negative | 1922231 - 1922881 | 24724.6 |
| acetylxylan esterase | DXC44_08050 | Not Available | Negative | 1922986 - 1924296 | 49236.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

