Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pasta domain-containing protein | DXC44_07695 | Not Available | Positive | 1830105 - 1832285 | 80413.7 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | DXC44_07700 | Not Available | Positive | 1832304 - 1833758 | 53286.2 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | DXC44_07705 | Not Available | Positive | 1833771 - 1835039 | 47029.8 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | DXC44_07710 | Not Available | Positive | 1835054 - 1836388 | 49945.6 |
| ftsw/roda/spove family cell cycle protein | DXC44_07715 | Not Available | Positive | 1836412 - 1837809 | 51362.1 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n- acetylglucosaminyltransferase | DXC44_07720 | Not Available | Positive | 1837874 - 1839004 | 40466.6 |
| udp-n-acetylmuramate--l-alanine ligase | DXC44_07725 | Not Available | Positive | 1838994 - 1840370 | 51210.4 |
| cell division protein ftsq | DXC44_07730 | Not Available | Positive | 1840367 - 1841104 | 27832.3 |
| cell division protein ftsa | DXC44_07735 | Not Available | Positive | 1841108 - 1842610 | 54983.8 |
| cell division protein ftsz | DXC44_07740 | Not Available | Positive | 1842648 - 1843952 | 47936.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

