Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4292 domain-containing protein | DXC44_07645 | Not Available | Negative | 1821431 - 1822264 | 31437.2 |
| tetratricopeptide repeat protein | DXC44_07650 | Not Available | Negative | 1822261 - 1824069 | 69691.2 |
| dutp diphosphatase | DXC44_07655 | Not Available | Negative | 1824079 - 1824513 | 15780.1 |
| deoxyguanosinetriphosphate triphosphohydrolase | DXC44_07660 | Not Available | Positive | 1824736 - 1826067 | 50252.4 |
| gnat family n-acetyltransferase | DXC44_07665 | Not Available | Negative | 1826156 - 1827136 | 37508.3 |
| glycerol acyltransferase | DXC44_07670 | Not Available | Negative | 1827160 - 1827978 | 30976.8 |
| hypothetical protein | DXC44_07675 | Not Available | Positive | 1828084 - 1828311 | 8969.17 |
| transcriptional regulator mraz | DXC44_07680 | Not Available | Positive | 1828346 - 1828810 | 18115.8 |
| ribosomal rna small subunit methyltransferase h | DXC44_07685 | Not Available | Positive | 1828807 - 1829721 | 34391.2 |
| hypothetical protein | DXC44_07690 | Not Available | Positive | 1829726 - 1830100 | 14479.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

