Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyribonucleotide nucleotidyltransferase | DXC44_07540 | Not Available | Positive | 1799569 - 1801704 | 78631.8 |
| rubredoxin | DXC44_07545 | Not Available | Negative | 1801889 - 1802053 | 5868.75 |
| nad-dependent deacylase | DXC44_07550 | Not Available | Negative | 1802128 - 1802826 | 25671.8 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | DXC44_07555 | Not Available | Positive | 1802954 - 1803538 | 21446.7 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | DXC44_07560 | Not Available | Positive | 1803560 - 1804426 | 31372.7 |
| na+-dependent phosphate transporter | DXC44_07565 | Not Available | Negative | 1804505 - 1804936 | 16464.9 |
| na/pi cotransporter family protein | DXC44_07570 | Not Available | Negative | 1805070 - 1806761 | 62887.8 |
| nucleoside kinase | DXC44_07575 | Not Available | Positive | 1806843 - 1808516 | 64724.8 |
| glycyl radical protein | DXC44_07580 | Not Available | Positive | 1808818 - 1811244 | 91994.6 |
| glycyl-radical enzyme activating protein | DXC44_07585 | Not Available | Positive | 1811249 - 1812157 | 33564.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

