Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DXC44_07430 | Not Available | Negative | 1779323 - 1781629 | 86200.5 |
| hypothetical protein | DXC44_07435 | Not Available | Negative | 1781654 - 1781992 | 12594.3 |
| duf3784 domain-containing protein | DXC44_07440 | Not Available | Negative | 1782297 - 1782614 | 11649.9 |
| fic family protein | DXC44_07445 | Not Available | Negative | 1782626 - 1783435 | 30821.3 |
| recombinase | DXC44_07450 | Not Available | Positive | 1783811 - 1785148 | 52967.9 |
| tigr04255 family protein | DXC44_07455 | Not Available | Positive | 1785237 - 1785974 | 28398.3 |
| hypothetical protein | DXC44_07460 | Not Available | Positive | 1785967 - 1786308 | 12865.3 |
| hypothetical protein | DXC44_07465 | Not Available | Positive | 1786305 - 1786922 | 23790.0 |
| dna-binding protein | DXC44_07475 | Not Available | Positive | 1788038 - 1788352 | 11866.5 |
| helicase | DXC44_07480 | Not Available | Positive | 1788357 - 1789547 | 46674.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

