Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | DXC44_07330 | Not Available | Positive | 1759182 - 1760507 | 49635.6 |
| efflux rnd transporter periplasmic adaptor subunit | DXC44_07335 | Not Available | Positive | 1760531 - 1761553 | 37687.0 |
| acrb/acrd/acrf family protein | DXC44_07340 | Not Available | Positive | 1761635 - 1764805 | 115925.0 |
| hypothetical protein | DXC44_07345 | Not Available | Positive | 1764878 - 1765171 | 11224.5 |
| hypothetical protein | DXC44_07350 | Not Available | Positive | 1765308 - 1766675 | 50814.9 |
| hypothetical protein | DXC44_07355 | Not Available | Positive | 1766662 - 1767624 | 36030.6 |
| mboat family protein | DXC44_07360 | Not Available | Positive | 1767602 - 1769083 | 57278.7 |
| acyltransferase | DXC44_07365 | Not Available | Negative | 1769140 - 1769877 | 27097.8 |
| hypothetical protein | DXC44_07370 | Not Available | Negative | 1769911 - 1770207 | 11622.0 |
| hypothetical protein | DXC44_07375 | Not Available | Negative | 1770295 - 1770723 | 15767.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

