Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine decarboxylase | DXC44_06765 | Not Available | Negative | 1605429 - 1606037 | 22182.6 |
| acyl-coa dehydrogenase | DXC44_06770 | Not Available | Negative | 1606496 - 1608202 | 63864.0 |
| four helix bundle protein | DXC44_06775 | Not Available | Negative | 1608244 - 1608624 | 14337.4 |
| electron transfer flavoprotein subunit alpha/fixb family protein | DXC44_06780 | Not Available | Negative | 1608660 - 1609679 | 36698.3 |
| electron transfer flavoprotein beta subunit/fixa family protein | DXC44_06785 | Not Available | Negative | 1609685 - 1610578 | 31873.2 |
| hypothetical protein | DXC44_06790 | Not Available | Positive | 1610945 - 1611205 | 9561.44 |
| hypothetical protein | DXC44_06795 | Not Available | Positive | 1611284 - 1612348 | 40208.2 |
| hypothetical protein | DXC44_06800 | Not Available | Positive | 1612345 - 1612923 | 22821.9 |
| radical sam mobile pair protein b | DXC44_06810 | Not Available | Negative | 1613549 - 1614466 | 35462.7 |
| arac family transcriptional regulator | DXC44_06820 | Not Available | Negative | 1614672 - 1615565 | 35387.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

