Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | DXC44_06515 | Not Available | Negative | 1546662 - 1547465 | 30911.8 |
| rna polymerase sigma-70 factor | DXC44_06520 | Not Available | Negative | 1547535 - 1548044 | 19967.9 |
| hypothetical protein | DXC44_06525 | Not Available | Negative | 1548053 - 1548283 | 8890.57 |
| site-specific integrase | DXC44_06530 | Not Available | Positive | 1548399 - 1549634 | 47891.2 |
| rhum protein | DXC44_06535 | Not Available | Positive | 1549646 - 1550008 | 13614.5 |
| dna-binding protein | DXC44_06540 | Not Available | Negative | 1550086 - 1550391 | 11724.1 |
| dna-binding protein | DXC44_06545 | Not Available | Negative | 1550423 - 1550722 | 11590.3 |
| hypothetical protein | DXC44_06550 | Not Available | Negative | 1550728 - 1550925 | 7273.61 |
| dna-binding protein | DXC44_06555 | Not Available | Positive | 1550924 - 1551286 | 14059.1 |
| dna-binding protein | DXC44_06560 | Not Available | Positive | 1551290 - 1551640 | 13925.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

