Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_06465 | Not Available | Negative | 1535288 - 1536232 | 37353.5 |
| galactofuranosyltransferase | DXC44_06470 | Not Available | Negative | 1536239 - 1537276 | 39065.2 |
| udp-galactopyranose mutase | DXC44_06475 | Not Available | Negative | 1537280 - 1538389 | 43222.0 |
| acetyltransferase | DXC44_06480 | Not Available | Negative | 1538376 - 1539305 | 37973.2 |
| hypothetical protein | DXC44_06485 | Not Available | Negative | 1539305 - 1540060 | 30027.6 |
| glycosyltransferase family 9 protein | DXC44_06490 | Not Available | Negative | 1540076 - 1541107 | 38619.5 |
| duf4254 domain-containing protein | DXC44_06495 | Not Available | Negative | 1541119 - 1541724 | 23737.4 |
| 4-phosphoerythronate dehydrogenase pdxb | DXC44_06500 | Not Available | Positive | 1541849 - 1542874 | 38267.8 |
| duf4249 domain-containing protein | DXC44_06505 | Not Available | Negative | 1543039 - 1544004 | 36369.1 |
| tonb-dependent receptor | DXC44_06510 | Not Available | Negative | 1544011 - 1546665 | 100786.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

