Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_05760 | Not Available | Negative | 1338039 - 1338413 | 14296.9 |
| hypothetical protein | DXC44_05765 | Not Available | Positive | 1338368 - 1338646 | 10801.4 |
| hypothetical protein | DXC44_05770 | Not Available | Positive | 1338683 - 1338991 | 11839.7 |
| hypothetical protein | DXC44_05775 | Not Available | Positive | 1339691 - 1339912 | 8511.09 |
| adenine nucleotide alpha hydrolase family protein | DXC44_05780 | Not Available | Negative | 1340606 - 1341361 | 29155.8 |
| hypothetical protein | DXC44_05785 | Not Available | Positive | 1341505 - 1342914 | 54177.8 |
| nodulation efficiency protein d (nfed) | DXC44_05790 | Not Available | Positive | 1342928 - 1343398 | 17112.5 |
| upf0365 family protein | DXC44_05795 | Not Available | Positive | 1343541 - 1344542 | 36124.0 |
| phosphorylase | DXC44_05800 | Not Available | Positive | 1344736 - 1345614 | 32767.5 |
| gaf domain-containing protein | DXC44_05805 | Not Available | Positive | 1345824 - 1346309 | 18151.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

