Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nlpc/p60 family protein | DXC44_05710 | Not Available | Positive | 1326974 - 1327486 | 19418.5 |
| had family hydrolase | DXC44_05715 | Not Available | Positive | 1327542 - 1329611 | 79713.3 |
| 50s ribosomal protein l21 | DXC44_05720 | Not Available | Positive | 1329825 - 1330142 | 11743.4 |
| 50s ribosomal protein l27 | DXC44_05725 | Not Available | Positive | 1330164 - 1330427 | 9251.19 |
| thiamine diphosphokinase | DXC44_05730 | Not Available | Negative | 1330485 - 1331120 | 23777.5 |
| nicotinamide riboside transporter pnuc | DXC44_05735 | Not Available | Negative | 1331107 - 1331679 | 22114.5 |
| serine--trna ligase | DXC44_05740 | Not Available | Positive | 1331799 - 1333073 | 47884.3 |
| mfs transporter | DXC44_05745 | Not Available | Positive | 1333214 - 1334431 | 43390.6 |
| bifunctional dihydroorotate dehydrogenase b nad binding subunit/nadph-dependent glutamate synthase | DXC44_05750 | Not Available | Positive | 1334614 - 1336911 | 82922.6 |
| duf4858 domain-containing protein | DXC44_05755 | Not Available | Positive | 1337322 - 1338092 | 29528.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

