Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | DXC44_05660 | Not Available | Positive | 1313867 - 1314655 | 30974.2 |
| class i sam-dependent rrna methyltransferase | DXC44_05665 | Not Available | Negative | 1315308 - 1316492 | 44521.1 |
| 3'-5' exonuclease domain-containing protein 2 | DXC44_05670 | Not Available | Negative | 1316482 - 1317132 | 24635.5 |
| duf5063 domain-containing protein | DXC44_05675 | Not Available | Negative | 1317129 - 1317692 | 21633.7 |
| dna translocase ftsk | DXC44_05680 | Not Available | Positive | 1317797 - 1320262 | 91840.0 |
| hypothetical protein | DXC44_05685 | Not Available | Positive | 1320279 - 1320893 | 23005.4 |
| thioredoxin-disulfide reductase | DXC44_05690 | Not Available | Positive | 1320963 - 1321910 | 34005.6 |
| insulinase family protein | DXC44_05695 | Not Available | Positive | 1321941 - 1324760 | 106190.0 |
| hypothetical protein | DXC44_05700 | Not Available | Positive | 1324770 - 1326257 | 57386.8 |
| abc transporter atp-binding protein | DXC44_05705 | Not Available | Positive | 1326270 - 1326977 | 26402.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

