Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_05500 | Not Available | Positive | 1288212 - 1288718 | 19152.8 |
| hypothetical protein | DXC44_05505 | Not Available | Positive | 1288731 - 1289324 | 23203.7 |
| hypothetical protein | DXC44_05510 | Not Available | Positive | 1289300 - 1289635 | 13419.2 |
| hypothetical protein | DXC44_05515 | Not Available | Positive | 1289639 - 1290295 | 25666.3 |
| hypothetical protein | DXC44_05520 | Not Available | Positive | 1290318 - 1290626 | 11732.5 |
| hypothetical protein | DXC44_05525 | Not Available | Positive | 1290640 - 1291050 | 15924.0 |
| hypothetical protein | DXC44_05530 | Not Available | Positive | 1291205 - 1291528 | 12043.5 |
| hypothetical protein | DXC44_05535 | Not Available | Positive | 1291500 - 1292156 | 24980.7 |
| hypothetical protein | DXC44_05540 | Not Available | Positive | 1292319 - 1292849 | 19843.1 |
| ribonuclease h | DXC44_05545 | Not Available | Positive | 1292846 - 1293244 | 14968.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

