Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_05450 | Not Available | Positive | 1283198 - 1283518 | 12479.2 |
| hypothetical protein | DXC44_05455 | Not Available | Positive | 1283529 - 1283957 | 16191.9 |
| hypothetical protein | DXC44_05460 | Not Available | Positive | 1283990 - 1284508 | 19617.4 |
| hypothetical protein | DXC44_05465 | Not Available | Positive | 1284543 - 1284722 | 6778.69 |
| hypothetical protein | DXC44_05470 | Not Available | Positive | 1284673 - 1284966 | 11076.4 |
| hypothetical protein | DXC44_05475 | Not Available | Positive | 1284978 - 1285481 | 18282.5 |
| radical sam protein | DXC44_05480 | Not Available | Positive | 1285499 - 1286203 | 27076.4 |
| hypothetical protein | DXC44_05485 | Not Available | Positive | 1286224 - 1287126 | 34333.9 |
| dna mismatch repair protein muts | DXC44_05490 | Not Available | Positive | 1287228 - 1287704 | 17477.9 |
| hypothetical protein | DXC44_05495 | Not Available | Positive | 1287743 - 1288189 | 16967.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

