Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_05400 | Not Available | Positive | 1274660 - 1275472 | 31074.1 |
| hypothetical protein | DXC44_05405 | Not Available | Positive | 1275451 - 1276236 | 30376.1 |
| duf932 domain-containing protein | DXC44_05410 | Not Available | Positive | 1276306 - 1277205 | 34053.7 |
| integrase | DXC44_05415 | Not Available | Positive | 1277217 - 1277807 | 23431.5 |
| hypothetical protein | DXC44_05420 | Not Available | Positive | 1277889 - 1278557 | 25887.1 |
| hypothetical protein | DXC44_05425 | Not Available | Positive | 1278688 - 1279278 | 22581.1 |
| hypothetical protein | DXC44_05430 | Not Available | Positive | 1279265 - 1281169 | 73610.4 |
| hypothetical protein | DXC44_05435 | Not Available | Positive | 1281166 - 1282038 | 34502.0 |
| tyrosine protein kinase | DXC44_05440 | Not Available | Positive | 1282179 - 1282850 | 25508.3 |
| thrombopoietin receptor | DXC44_05445 | Not Available | Positive | 1282847 - 1283197 | 13556.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

