Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_05300 | Not Available | Positive | 1263306 - 1263551 | 9436.3 |
| hypothetical protein | DXC44_05305 | Not Available | Positive | 1263580 - 1264227 | 24504.2 |
| hypothetical protein | DXC44_05310 | Not Available | Positive | 1264241 - 1264909 | 25346.2 |
| rna-directed dna polymerase | DXC44_05315 | Not Available | Positive | 1264902 - 1266164 | 48171.2 |
| hypothetical protein | DXC44_05320 | Not Available | Positive | 1266487 - 1266984 | 17889.2 |
| hypothetical protein | DXC44_05325 | Not Available | Positive | 1267034 - 1267513 | 18867.1 |
| ubiquitin carboxyl-hydrolase | DXC44_05330 | Not Available | Positive | 1267510 - 1268598 | 41143.9 |
| hypothetical protein | DXC44_05335 | Not Available | Positive | 1268801 - 1268986 | 7390.16 |
| hypothetical protein | DXC44_05340 | Not Available | Positive | 1268961 - 1269140 | 7044.45 |
| hypothetical protein | DXC44_05345 | Not Available | Positive | 1269153 - 1269440 | 10590.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

