Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_05250 | Not Available | Positive | 1258519 - 1258731 | 7827.4 |
| hypothetical protein | DXC44_05255 | Not Available | Positive | 1258736 - 1258975 | 8530.16 |
| hypothetical protein | DXC44_05260 | Not Available | Positive | 1258981 - 1259508 | 20132.7 |
| hypothetical protein | DXC44_05265 | Not Available | Positive | 1259549 - 1260646 | 42183.7 |
| hypothetical protein | DXC44_05270 | Not Available | Positive | 1260657 - 1261547 | 36033.0 |
| hypothetical protein | DXC44_05275 | Not Available | Positive | 1261544 - 1262002 | 17478.4 |
| duf3846 domain-containing protein | DXC44_05280 | Not Available | Positive | 1262018 - 1262293 | 9997.97 |
| hypothetical protein | DXC44_05285 | Not Available | Positive | 1262298 - 1262777 | 18145.7 |
| hypothetical protein | DXC44_05290 | Not Available | Positive | 1262783 - 1263103 | 12033.9 |
| hypothetical protein | DXC44_05295 | Not Available | Positive | 1263114 - 1263293 | 6872.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

