Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_05200 | Not Available | Positive | 1250724 - 1251167 | 17471.2 |
| rlob domain-containing protein | DXC44_05205 | Not Available | Negative | 1251319 - 1251951 | 23890.6 |
| atp-binding protein | DXC44_05210 | Not Available | Negative | 1251926 - 1253173 | 47575.2 |
| hypothetical protein | DXC44_05215 | Not Available | Negative | 1253708 - 1254499 | 29680.7 |
| hypothetical protein | DXC44_05220 | Not Available | Positive | 1255088 - 1255276 | 7205.96 |
| hypothetical protein | DXC44_05225 | Not Available | Positive | 1255442 - 1255633 | 7586.54 |
| hypothetical protein | DXC44_05230 | Not Available | Positive | 1256423 - 1256995 | 20982.0 |
| hypothetical protein | DXC44_05235 | Not Available | Positive | 1257163 - 1257432 | 9697.11 |
| hypothetical protein | DXC44_05240 | Not Available | Positive | 1257703 - 1258095 | 14893.0 |
| hypothetical protein | DXC44_05245 | Not Available | Positive | 1258112 - 1258369 | 9594.83 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

