Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| clp protease clpp | DXC44_05150 | Not Available | Negative | 1242727 - 1243965 | 45042.5 |
| hypothetical protein | DXC44_05155 | Not Available | Negative | 1244249 - 1244953 | 26967.6 |
| hypothetical protein | DXC44_05160 | Not Available | Negative | 1244950 - 1245528 | 22137.3 |
| hypothetical protein | DXC44_05165 | Not Available | Negative | 1245509 - 1246144 | 24172.6 |
| duf935 family protein | DXC44_05170 | Not Available | Negative | 1246369 - 1247691 | 49935.5 |
| hypothetical protein | DXC44_05175 | Not Available | Positive | 1247935 - 1248432 | 19309.1 |
| hypothetical protein | DXC44_05180 | Not Available | Positive | 1248443 - 1248781 | 12510.2 |
| dna-binding protein | DXC44_05185 | Not Available | Positive | 1248768 - 1249901 | 43725.0 |
| hypothetical protein | DXC44_05190 | Not Available | Positive | 1249904 - 1250341 | 16623.6 |
| hypothetical protein | DXC44_05195 | Not Available | Positive | 1250498 - 1250737 | 9105.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

